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Predicting internal protein dynamics from structures using coupled networks of hindered rotators
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10.1063/1.2110028
/content/aip/journal/jcp/123/20/10.1063/1.2110028
http://aip.metastore.ingenta.com/content/aip/journal/jcp/123/20/10.1063/1.2110028
View: Figures

Figures

Image of FIG. 1.
FIG. 1.

Definitions of the coordinate systems used in the equations.

Image of FIG. 2.
FIG. 2.

(a) (Dashed line with error bars) Profile of experimental order parameters as a function of residue number in calbindin (Ref. 18) and (continuous line with error bars) order parameters predicted from the potentials defined in Eq. (20) and derived from a set of ten NMR stuctures (see text for details). (b) and (c) Similar plots for interleukin 4 (Ref. 23) and for calmodulin (Ref. 24).

Image of FIG. 3.
FIG. 3.

Correlation plot of experimental vs predicted order parameters corresponding to Fig. 2.

Image of FIG. 4.
FIG. 4.

(Dashed line with error bars) Profile of experimentally determined local correlation times as a function of residue number in calbindin (Ref. 18) and (continuous line) correlation times predicted from potentials derived from the stucture determined by the same set of NMR structures as in Fig. 2.

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/content/aip/journal/jcp/123/20/10.1063/1.2110028
2005-11-18
2014-04-17
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752b84549af89a08dbdd7fdb8b9568b5 journal.articlezxybnytfddd
Scitation: Predicting internal protein dynamics from structures using coupled networks of hindered rotators
http://aip.metastore.ingenta.com/content/aip/journal/jcp/123/20/10.1063/1.2110028
10.1063/1.2110028
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