Example illustration and notation for interacting Brownian particles in a confined geometry.
Illustration of the structured Brownian subunits for protein macromolecules. Only the first (N-terminal) and second residues are shown.
Nomenclature and illustration of the tetrahedral joint associated with each α-carbon atom of the protein.
t = 0.0ns. α- helix placed inside nanotube.
t = 0.061ns. Helical structure maintained despite compression by nanotube.
t = 0.10ns. Screwlike motion evident.
t = 0.17ns. Three to four residues have emerged from the nanotube.
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