Infrared photodissociation of a water molecule from a flexible molecule-H2O complex: Rates and conformational product yields following XH stretch excitation
J. Chem. Phys. 126, 134306 (2007); doi:10.1063/1.2713109
Published 3 April 2007
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Infrared-ultraviolet hole-burning and hole-filling spectroscopies have been used to study IR-induced dissociation of the tryptamine·H2O and tryptamine·D2O complexes. Upon complexation of a single water molecule, the seven conformational isomers of tryptamine collapse to a single structure that retains the same ethylamine side chain conformation present in the most highly populated conformer of tryptamine monomer. Infrared excitation of the tryptamine·H2O complex was carried out using a series of infrared absorptions spanning the range of 2470–3715 cm−1. The authors have determined the conformational product yield over this range and the dissociation rate near threshold, where it is slow enough to be measured by our methods. The observed threshold for dissociation occurred at 2872 cm−1 in tryptamine·H2O and at 2869 cm−1 in tryptamine·D2O, with no dissociation occurring on the time scale of the experiment (~2 µs) at 2745 cm−1. The dissociation time constants varied from ~200 ns for the 2869 cm−1 band of tryptamine·D2O to ~25 ns for the 2872 cm−1 band of tryptamine·H2O. This large isotope dependence is associated with a zero-point energy effect that increases the binding energy of the deuterated complex by ~190 cm−1, thereby reducing the excess energy available at the same excitation energy. At all higher energies, the dissociation lifetime was shorter than the pulse duration of our lasers (8 ns). At all wavelengths, the observed products in the presence of collisions are dominated by conformers A and B of tryptamine monomer, with small contributions from the other minor conformers. In addition, right at threshold (2869 cm−1), tryptamine·D2O dissociates exclusively to conformer A in the absence of collisions with helium, while both A and B conformational products are observed in the presence of collisions with helium. Using resolution-of-identity approximation to second-order Møller-Plesset binding energies extrapolated to the complete basis set limit and harmonic vibrational frequencies and transition states calculated at the density functional limit B3LYP/6-31+G* level of theory, Rice-Ramsperger-Kassel-Marcus (RRKM) predictions for the dissociation, isomerization, and water shuttling rates as a function of energy are made. At threshold, the experimental dissociation rate is almost 103 faster than RRKM predictions. Reasons for this apparent non-RRKM behavior will be discussed.
©2007 American Institute of Physics
| History: | Received 8 November 2006; accepted 7 February 2007; published 3 April 2007 |
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http://link.aip.org/link/?JCPSA6/126/134306/1 |
Supplemental Material
- README.TXT (1 kB) 2-Jul-2007 14:38
- TABLES.rtf (192 kB) 13-Feb-2007 10:34
KEYWORDS and PACS
organic compounds,
biochemistry,
molecular biophysics,
optical hole burning,
reaction rate constants,
isomerism,
isotope effects,
perturbation theory,
density functional theory,
vibrational states,
binding energy,
isomerisation,
photodissociation,
photoexcitation,
ultraviolet spectra,
infrared spectra
- 87.15.Mi
Spectra, photodissociation, and photoionization of biomolecules; bioluminescence - 87.15.Rn
Biochemical reactions and kinetics; polymerization - 82.20.Hf
Product distribution in chemical kinetics - 82.20.Tr
Isotope effects in chemical kinetics including muonium - 82.50.Bc
Chemical processes caused by infrared radiation - 82.50.Hp
Chemical processes caused by visible and UV light - YEAR: 2007
RELATED DATABASES
PUBLICATION DATA
0021-9606 (print)
1089-7690 (online)
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