Fast electron-correlation methods for molecular crystals: An application to the
,
1, and
2 modifications of solid formic acid
J. Chem. Phys. 129, 204104 (2008); doi:10.1063/1.3021077
Published 25 November 2008
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A method for the routine first-principles determination of energies, structures, and phonons of molecular crystals by high-accuracy electron-correlation theories has been proposed. It approximates the energy per unit cell of a crystal by a sum of monomer and dimer energies in an embedding field of self-consistent (and, therefore, polarizable) atomic charges and dipole moments. First and second energy derivatives with respect to atom positions and lattice constants (useful for characterizing structures and phonons) have also been computed efficiently with a long-range electrostatic correction. The method has been applied to solid formic acid modeled as infinite one-dimensional hydrogen-bonded chains. Accurate energies (with corrections for basis-set superposition errors), structural parameters, and frequencies have been obtained for three polymorphic structures (
1,
2, and
) with second-order perturbation theory or higher. On this basis, reliable assignments of their infrared, Raman, and inelastic neutron scattering spectral bands have been proposed. The diffraction and spectroscopic data are shown to be consistent with the pristine
1 form and the hitherto-inexplicable infrared band splitting can be assigned to the in-phase and out-of-phase vibrations of adjacent hydrogen-bonded molecules rather than speculated polymorphism. Spectral features expected from the
2 and
forms have also been predicted and are found to be incompatible with the observed Raman and inelastic neutron scattering spectra in the low-frequency region.
©2008 American Institute of Physics
1,
2, and
) with second-order perturbation theory or higher. On this basis, reliable assignments of their infrared, Raman, and inelastic neutron scattering spectral bands have been proposed. The diffraction and spectroscopic data are shown to be consistent with the pristine
1 form and the hitherto-inexplicable infrared band splitting can be assigned to the in-phase and out-of-phase vibrations of adjacent hydrogen-bonded molecules rather than speculated polymorphism. Spectral features expected from the
2 and
forms have also been predicted and are found to be incompatible with the observed Raman and inelastic neutron scattering spectra in the low-frequency region.
©2008 American Institute of Physics
| History: | Received 4 September 2008; accepted 14 October 2008; published 25 November 2008 |
| Permalink: |
http://link.aip.org/link/?JCPSA6/129/204104/1 |
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KEYWORDS and PACS
ab initio calculations,
density functional theory,
electron correlations,
hydrogen bonds,
infrared spectra,
lattice constants,
molecular moments,
neutron diffraction,
organic compounds,
perturbation theory,
phonon dispersion relations,
polymorphism,
Raman spectra
- 71.45.Gm
Exchange, correlation, dielectric and magnetic response functions, plasmons - 61.66.Hq
Crystal structure of specific organic compounds - 78.30.Jw
Infrared and Raman spectra in organic compounds, polymers - 61.50.Lt
Crystal binding; cohesive energy - 71.15.Mb
Density functional theory, local density approximation, gradient and other corrections (condensed matter electronic structure) - 63.20.dk
First-principles theory of phonon states, normal modes and phonon dispersion - YEAR: 2008
RELATED DATABASES
PUBLICATION DATA
0021-9606 (print)
1089-7690 (online)
REFERENCES (51)
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- J. Maddox,
Nature (London) 335, 201 (1988) . - For example, N. D. Drummond and R. J. Needs, Phys. Rev. B 73, 024107 (2006).
- P. Ball,
Nature (London) 381, 648 (1996) ;
G. R. Desiraju, - S. Hirata, M. Valiev, M. Dupuis, S. S. Xantheas, S. Sugiki, and H. Sekino,
Mol. Phys. 103, 2255 (2005) ;
M. Kamiya, S. Hirata, and M. Valiev, J. Chem. Phys. 128, 074103 (2008). - S. F. Boys and F. Bernardi,
Mol. Phys. 19, 553 (1970) ;
P. Valiron and I. Mayer, - Y. Mikawa, R. J. Jakobsen, and J. W. Brasch, J. Chem. Phys. 45, 4750 (1966).
- Y. Mikawa, J. W. Brasch, and R. J. Jakobsen,
J. Mol. Spectrosc. 24, 314 (1967) . - H. R. Zelsmann, F. Bellon, Y. Marechal, and B. Bullemer,
Chem. Phys. Lett. 6, 513 (1970) . - R. C. Millikan and K. S. Pitzer,
J. Am. Chem. Soc. 80, 3515 (1958) . - Y. Shao, L. F. Molnar, Y. Jung, J. Kussmann, C. Ochsenfeld, S. T. Brown, A. T. B. Gilbert, L. V. Slipchenko, S. V. Levchenko, D. P. O'neill, R. A. Distasio, R. C. Lochan, T. Wang, G. J. O. Beran, N. A. Besley, J. M. Herbert, C. Y. Lin, T. Van Voorhis, S. H. Chien, A. Sodt, R. P. Steele, V. A. Rassolov, P. E. Maslen, P. P. Korambath, R. D. Adamson, B. Austin, J. Baker, E. F. C. Byrd, H. Dachsel, R. J. Doerksen, A. Dreuw, B. D. Dunietz, A. D. Dutoi, T. R. Furlani, S. R. Gwaltney, A. Heyden, S. Hirata, C. P. Hsu, G. Kedziora, R. Z. Khalliulin, P. Klunzinger, A. M. Lee, M. S. Lee, W. Liang, I. Lotan, N. Nair, B. Peters, E. I. Proynov, P. A. Pieniazek, Y. M. Rhee, J. Ritchie, E. Rosta, C. D. Sherrill, A. C. Simmonett, J. E. Subotnik, H. L. Woodcock, W. Zhang, A. T. Bell, A. K. Chakraborty, D. M. Chipman, F. J. Keil, A. Warshel, W. J. Hehre, H. F. Schaefer, J. Kong, A. I. Krylov, P. M. W. Gill, and M. Head-Gordon,
Phys. Chem. Chem. Phys. 8, 3172 (2006) . - T. P. Straatsma, E. Aprà, T. L. Windus, M. Dupuis, E. J. Bylaska, W. De Jong, S. Hirata, D. M. A. Smith, M. T. Hackler, L. Pollack, R. J. Harrison, J. Nieplocha, V. Tipparaju, M. Krishnan, A. A. Auer, E. Brown, G. Cisneros, G. I. Fann, H. Fruchtl, J. Garza, K. Hirao, R. Kendall, J. A. Nichols, K. Tsemekhman, M. Valiev, K. Wolinski, J. Anchell, D. Bernholdt, P. Borowski, T. Clark, D. Clerc, H. Dachsel, M. Deegan, K. Dyall, D. Elwood, E. Glendening, M. Gutowski, A. Hess, J. Jaffe, B. Johnson, J. Ju, R. Kobayashi, R. Kutteh, Z. Lin, R. Littlefield, X. Long, B. Meng, T. Nakajima, S. Niu, M. Rosing, G. Sandrone, M. Stave, H. Taylor, G. Thomas, J. Van Lenthe, A. Wong, and Z. Zhang, NWCHEM, a computational chemistry package for parallel computers, Pacific Northwest National Laboratory, Richland, WA, 2003.
- F. A. Momany,
J. Phys. Chem. 82, 592 (1978) . - K. Kitaura, S.-I. Sugiki, T. Nakano, Y. Komeiji, and M. Uebayasi,
Chem. Phys. Lett. 336, 163 (2001) . - H. Teramae, T. Yamabe, and A. Imamura, J. Chem. Phys. 81, 3564 (1984).
- S. Hirata and S. Iwata,
J. Mol. Struct.: THEOCHEM 451, 121 (1998) . - K. Kitaura, T. Sawai, T. Asada, T. Nakano, and M. Uebayasi,
Chem. Phys. Lett. 312, 319 (1999) . - K. Kitaura, E. Ikeo, T. Asada, T. Nakano, and M. Uebayasi,
Chem. Phys. Lett. 313, 701 (1999) . - G. S. Tschumper,
Chem. Phys. Lett. 427, 185 (2006) . - E. E. Dahlke and D. G. Truhlar,
J. Chem. Theory Comput. 3, 46 (2007) ; - N. Jiang, J. Ma, and Y. Jiang, J. Chem. Phys. 124, 114112 (2006).
- S. H. Li, J. Shen, W. Li, and Y. S. Jiang, J. Chem. Phys. 125, 074109 (2006).
- H. Stoll, B. Paulus, and P. Fulde, J. Chem. Phys. 123, 144108 (2005).
- V. Deev and M. A. Collins, J. Chem. Phys. 122, 154102 (2005);
- F. R. Manby, D. Alfè, and M. J. Gillan,
Phys. Chem. Chem. Phys. 8, 5178 (2006) . - A. L. Ringer and C. D. Sherrill,
Chem.-Eur. J. 14, 2542 (2008) . - R. Podeszwa, B. M. Rice, and K. Szalewicz, Phys. Rev. Lett. 101, 115503 (2008).
- I. Mayer,
Int. J. Quantum Chem. 23, 341 (1983) ;
I. Mayer and Á. Vibók, - P. Pulay,
Mol. Phys. 17, 197 (1969) ; - N. C. Handy and H. F. Schaefer III, J. Chem. Phys. 81, 5031 (1984).
- S. M. Blumenfeld and H. Fast,
Spectrochim. Acta, Part A 24, 1449 (1968) . - W. H. Hocking,
Z. Naturforsch. A 31, 1113 (1976) . - T. Miyazawa and K. S. Pitzer, J. Chem. Phys. 30, 1076 (1959).
- F. Holtzberg, B. Post, and I. Fankuchen,
Acta Crystallogr. 6, 127 (1953) . - I. Nahringbauer,
Acta Crystallogr., Sect. B: Struct. Sci. 34, 315 (1978) . - A. Albinati, K. D. Rouse, and M. W. Thomas,
Acta Crystallogr., Sect. B: Struct. Crystallogr. Cryst. Chem. 34, 2188 (1978) . - J. Grip and E. J. Samuelsen,
Phys. Scr. 24, 52 (1981) . - D. Wiechert, D. Mootz, and T. Dahlems,
J. Am. Chem. Soc. 119, 12665 (1997) . - H. Shimizu,
Physica B & C 139–140, 479 (1986) . - D. R. Allan and S. J. Clark, Phys. Rev. Lett. 82, 3464 (1999).
- A. F. Goncharov, M. R. Manaa, J. M. Zaug, R. H. Gee, L. E. Fried, and W. B. Montgomery, Phys. Rev. Lett. 94, 065505 (2005).
- M. Gadermann, D. Vollmar, and R. Signorell,
Phys. Chem. Chem. Phys. 9, 4535 (2007) . - S. Tosoni, C. Tuma, J. Sauer, B. Civalleri, and P. Ugliengo, J. Chem. Phys. 127, 154102 (2007);
- R. Tubino and G. Zerbi, J. Chem. Phys. 53, 1428 (1970).
- W. H. Press, S. A. Teukolsky, W. T. Vetterling, and B. P. Flannery, Numerical Recipes in Fortran: The Art of Scientific Computing, 2nd ed. (Cambridge University Press, Cambridge, 1992).
- S. Hirata and S. Iwata,
J. Phys. Chem. A 102, 8426 (1998) . - B. C. Garrett,
Science 303, 1146 (2004) . - See EPAPS Document No. E-JCPSA6-129-032843 for Tables VII and VIII and Figs. 8 and 9. For more information on EPAPS see http://www.aip.org/pubservs/epaps.html. [EPAPS]
- H. T. Flakus and B. Stachowska,
Chem. Phys. 330, 231 (2006) . - C. V. Berney and J. W. White,
J. Am. Chem. Soc. 99, 6878 (1977) . - D. H. Johnson, C. V. Berney, S. Yip, and S. H. Chen, J. Chem. Phys. 71, 292 (1979).
- S. Hirata, H. Torii, Y. Furukawa, M. Tasumi, and J. Tomkinson,
Chem. Phys. Lett. 261, 241 (1996) .
H. M. Netzloff and M. A. Collins, ibid. 127, 134113 (2007).
B. Jeziorski, R. Moszynski, and K. Szalewicz,
E. Gianinetti, M. Raimondi, and E. Tornaghi,
E. Gianinetti, I. Vandoni, A. Famulari, and M. Raimondi,
A. Hamza, Á. Vibók, G. J. Halász, and I. Mayer,
T. Nagata, O. Takahashi, K. Saito, and S. Iwata, J. Chem. Phys. 115, 3553 (2001);
T. Nagata and S. Iwata, ibid. 120, 3555 (2004);
R. Z. Khaliullin, M. Head-Gordon, and A. T. Bell, ibid. 124, 204105 (2006);
S. Iwata and T. Nagata,








