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Phys. Rev. Lett. 96, 058105 (2006) [4 pages]

Hidden Stochastic Nature of a Single Bacterial Motor

Ekaterina A. Korobkova, Thierry Emonet, Heungwon Park, and Philippe Cluzel
The Institute for Biophysical Dynamics, The James Franck Institute, The University of Chicago, 56540 South Ellis Avenue, Chicago, Illinois 60637, USA
Received 13 September 2005; published 7 February 2006

The rotary flagellar motor of Escherichia coli bacterium switches stochastically between the clockwise (CW) and counterclockwise (CCW) direction. We found that the CW and CCW intervals could be described by a gamma distribution, suggesting the existence of hidden Markov steps preceding each motor switch. Power spectra of time series of switching events exhibited a peaking frequency instead of the Lorentzian profile expected from standard kinetic two-state models. Our analysis indicates that the number of hidden steps may be a key dynamical parameter underlying the switching process in a single bacterial motor as well as in large cooperative molecular systems.

©2006 The American Physical Society

URL: http://link.aps.org/doi/10.1103/PhysRevLett.96.058105
DOI: 10.1103/PhysRevLett.96.058105
PACS: 87.16.Xa; 87.15.He; 82.20.Uv; 87.17.Jj
  • 87.16.Xa
    Signal transduction (subcellular structure/processes)
  • 87.15.He
    Biomolecular dynamics and conformational changes
  • 82.20.Uv
    Stochastic theories of rate constants in chemical kinetics
  • 87.17.Jj
    Cell locomotion; chemotaxis and directed motion
  • YEAR: 2006
KEYWORDS: microorganisms, biochemistry, molecular biophysics, Markov processes

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