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Control of Pathways and Yields of Protein Crystallization through the Interplay of Nonspecific and Specific Attractions

Source: Phys. Rev. Lett. 105, 088102 (2010); doi:10.1103/PhysRevLett.105.088102

Published 18 August 2010

PACS
  • 87.15.nt
    Crystallization of biological macromolecular solutions
  • 81.16.Dn
    Self-assembly in nanofabrication and processing
  • 87.10.Rt
    Monte Carlo simulations (biological/medical physics)
  • 87.15.km
    Protein-protein interactions
  • YEAR: 2010
PUBLICATION DATA
ISSN:
1553-9644 (online)
Publisher:
AIP is a member of CrossRef APS
Stephen Whitelam
Molecular Foundry, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, California 94720, USA
We use computer simulation to study crystal-forming model proteins equipped with interactions that are both orientationally specific and nonspecific. Distinct dynamical pathways of crystal formation can be selected by tuning the strengths of these interactions. When the nonspecific interaction is strong, liquidlike clustering can precede crystallization; when it is weak, growth can proceed via ordered nuclei. Crystal yields are in certain parameter regimes enhanced by the nonspecific interaction, even though it promotes association without local crystalline order. Our results suggest that equipping nanoscale components with weak nonspecific interactions (such as depletion attractions) can alter both their dynamical pathway of assembly and optimize the yield of the resulting material.
History: Received 13 April 2010; published 18 August 2010
Permalink: http://link.aps.org/abstract/PRL/v105/e088102
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