Polypeptides in alpha-helix conformation perform as diodes
Source: J. Chem. Phys. 132, 065102 (2010); doi:10.1063/1.3310387
Published 11 February 2010
KEYWORDS and PACS
ab initio calculations,
electric moments,
molecular configurations,
molecular electronics,
molecular moments,
orbital calculations,
polymers,
semiconductor diodes
- 85.65.+h
Molecular electronic devices - 31.15.A-
Ab initio calculations (atoms and molecules) - 36.20.Hb
Macromolecular configuration (bonds, dimensions) - 85.30.Kk
Semiconductor junction diodes - 33.15.Kr
Molecular electric and magnetic moments (and derivatives), polarizability, and magnetic susceptibility - 36.20.Ey
Macromolecular conformation (statistics and dynamics) - YEAR: 2010
RELATED DATABASES
To view database links for this article,
you need to log in.
you need to log in.
To view database links for this article,
you need to log in.
you need to log in.
PUBLICATION DATA
Molecules that resemble a semiconductor diode depletion zone are those with an intrinsic electric dipole, which were suggested as potential electronic devices. However, so far, no single molecule has met such a goal because any electron donor-acceptor linker strongly diminishes any possibility of diode behavior. We find an intrinsic diode behavior in polypeptides such as poly(L-alanine) and polyglycine in
-helix conformation, explained in terms of molecular orbital theory using ab initio methods. The application of an antiparallel electric field with respect to the molecular dipole yields a gradual increase in current through the junction because the valence and conduction orbitals approach each other reducing their gap as the bias increases. However, a parallel field makes the gap energy increase, avoiding the pass of the electrons.
©2010 American Institute of Physics
-helix conformation, explained in terms of molecular orbital theory using ab initio methods. The application of an antiparallel electric field with respect to the molecular dipole yields a gradual increase in current through the junction because the valence and conduction orbitals approach each other reducing their gap as the bias increases. However, a parallel field makes the gap energy increase, avoiding the pass of the electrons.
©2010 American Institute of Physics
| History: | Received 22 November 2009; accepted 19 January 2010; published 11 February 2010 |
| Permalink: |
http://link.aip.org/link/?JCPSA6/132/065102/1 |
REFERENCES (55)
For access to fully linked references, you need to log in.
For access to fully linked references, you need to Log in.
- M. A. Reed, C. Zhou, C. J. Muller, T. P. Burgin, and J. M. Tour,
Science 278, 252 (1997) . - C. Joachim, J. K. Gimzewski, and A. Aviram,
Nature (London) 408, 541 (2000) . - X. D. Cui, A. Primak, X. Zarate, J. Tomfohr, O. F. Sankey, A. L. Moore, T. A. Moore, D. Gust, G. Harris, and S. M. Lindsay,
Science 294, 571 (2001) . - Z. L. Yuan, B. E. Kardynal, R. M. Stevenson, A. J. Shields, C. J. Lobo, K. Cooper, N. S. Beattie, D. A. Ritchie, and M. Pepper,
Science 295, 102 (2002) . - A. Nitzan and M. A. Ratner,
Science 300, 1384 (2003) . - Z. F. Huang, B. Q. Xu, Y. C. Chen, M. Di Ventra, and N. J. Tao,
Nano Lett. 6, 1240 (2006) . - J. L. Pitters and R. A. Wolkow,
Nano Lett. 6, 390 (2006) . - L. Venkataraman, J. E. Klare, C. Nuckolls, M. S. Hybertsen, and M. L. Steigerwald,
Nature (London) 442, 904 (2006) . - M. Galperin, M. A. Ratner, A. Nitzan, and A. Troisi,
Science 319, 1056 (2008) . - S. Welack, J. B. Maddox, M. Esposito, U. Harbola, and S. Mukamel,
Nano Lett. 8, 1137 (2008) . - A. Aviram and M. A. Ratner,
Chem. Phys. Lett. 29, 277 (1974) . - G. J. Ashwell, J. R. Sambles, A. S. Martin, W. G. Parker, and M. Szablewski, J. Chem. Soc., Chem. Commun. 1990, 1374.
- N. J. Geddes, J. R. Sambles, D. J. Jarvis, W. G. Parker, and D. J. Sandman, Appl. Phys. Lett. 56, 1916 (1990).
- N. J. Geddes, J. R. Sambles, D. J. Jarvis, W. G. Parker, and D. J. Sandman, J. Appl. Phys. 71, 756 (1992).
- A. S. Martin, J. R. Sambles, and G. J. Ashwell, Phys. Rev. Lett. 70, 218 (1993).
- C. M. Fischer, M. Burghard, S. Roth, and K. V. Klitzing,
Europhys. Lett. 28, 129 (1994) . - M. K. Ng and L. P. Yu,
Angew. Chem., Int. Ed. 41, 3598 (2002) . - M. K. Ng, D. C. Lee, and L. P. Yu,
J. Am. Chem. Soc. 124, 11862 (2002) . - L. M. Yan and J. M. Seminario,
Int. J. Quantum Chem. 107, 440 (2007) . - J. Zhao, C. G. Zeng, X. Cheng, K. D. Wang, G. W. Wang, J. L. Yang, J. G. Hou, and Q. S. Zhu, Phys. Rev. Lett. 95, 045502 (2005).
- L. Pauling, R. B. Corey, and H. R. Branson,
Proc. Natl. Acad. Sci. U.S.A. 37, 205 (1951) . - W. G. J. Hol,
Nature (London) 273, 443 (1978) . - A. Wada,
Adv. Biophys. 9, 1 (1976) . - S. Sek, K. Swiatek, and A. Misicka,
J. Phys. Chem. B 109, 23121 (2005) . - K. Kitagawa, T. Morita, and S. Kimura,
Thin Solid Films 509, 18 (2006) . - J. Vila, R. L. Williams, J. A. Grant, J. Wojcik, and H. A. Scheraga,
Proc. Natl. Acad. Sci. U.S.A. 89, 7821 (1992) . - S. Sek, A. Tolak, A. Misicka, B. Palys, and R. Bilewicz,
J. Phys. Chem. B. 109, 18433 (2005) . - C. N. Pace and J. M. Scholtz,
Biophys. J. 75, 422 (1998) . - SPARTAN, Version 8.0 (Wavefunction, Inc., Irvine, CA).
- H. Basch and M. A. Ratner, J. Chem. Phys. 119, 11926 (2003).
- G. A. Petersson, H. Nakatsuji, M. Hada et al., GAUSSIAN03, Revision E.01, Gaussian, Inc., Pittsburgh, PA, 2003.
- P. A. Derosa and J. M. Seminario,
J. Phys. Chem. B 105, 471 (2001) . - J. M. Seminario, A. G. Zacarias, and P. A. Derosa, J. Chem. Phys. 116, 1671 (2002).
- J. M. Seminario and L. Yan,
Int. J. Quantum Chem. 102, 711 (2005) . - P. A. Derosa, S. Guda, and J. M. Seminario,
J. Am. Chem. Soc. 125, 14240 (2003) . - J. M. Seminario, Y. F. Ma, L. A. Agapito, L. M. Yan, R. A. Araujo, S. Bingi, N. S. Vadlamani, K. Chagarlamudi, T. S. Sudarshan, M. L. Myrick, P. E. Colavita, P. D. Franzon, D. P. Nackashi, L. Cheng, Y. X. Yao, and J. M. Tour,
J. Nanosci. Nanotechnol. 4, 907 (2004) . - J. M. Seminario and P. A. Derosa,
J. Am. Chem. Soc. 123, 12418 (2001) . - J. M. Seminario, C. De La Cruz, P. A. Derosa, and L. Yan,
J. Phys. Chem. B 108, 17879 (2004) . - L. Yan and J. M. Seminario,
J. Phys. Chem. 109, 6628 (2005) . - J. A. Sotelo, L. Yan, M. Wang, and J. M. Seminario, Phys. Rev. A 75, 022511 (2007).
- E. J. Bautista, L. Yan, and J. M. Seminario, J. Phys. Chem. 111, 14552 (2007).
- Y. Zhao, N. E. Schultz, and D. G. Truhlar,
J. Chem. Theory Comput. 2, 364 (2006) . - P. J. Hay and W. R. Wadt, J. Chem. Phys. 82, 270 (1985).
- W. R. Wadt and P. J. Hay, J. Chem. Phys. 82, 284 (1985).
- G. A. Petersson and M. A. Al-Laham, J. Chem. Phys. 94, 6081 (1991).
- G. A. Petersson, A. Bennett, T. G. Tensfeldt, M. A. Al-Laham, W. A. Shirley, and J. Mantzaris, J. Chem. Phys. 89, 2193 (1988).
- P. J. Hay and W. R. Wadt, J. Chem. Phys. 82, 299 (1985).
- C. Roetti, in Quantum-Mechanical Ab-Initio Calculation of the Properties of Crystalline Materials, edited by C. Pisani (Springer-Verlag, Berlin, 1996), Vol. 67, pp. 125–137.
- P. Danielewicz, Ann. Phys. 152, 239 (1984).
- C. Caroli, D. Saintjam, R. Combesco, and P. Nozieres,
J. Phys. C, 5, 21 (1972) . - K. Salazar-Salinas, L. A. Jauregui, C. Kubli-Garfias, and J. M. Seminario, J. Chem. Phys. 130, 105101 (2009).
- K. Kitagawa, T. Morita, K. Megumi, and S. Kimura,
J. Polym. Sci., Part A: Polym. Chem. 41, 3493 (2003) . - K. Kitagawa, T. Morita, and S. Kimura,
J. Phys. Chem. B 109, 13906 (2005) . - P. Gilli, V. Bertolasi, V. Ferretti, and G. Gilli,
J. Am. Chem. Soc. 122, 10405 (2000) . - G. Gilli, F. Bellucci, V. Ferretti, and V. Bertolasi,
J. Am. Chem. Soc. 111, 1023 (1989) .
ADVERTISEMENT

